Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dihydroorotase | B0O44_10475 | Not Available | Positive | 2702164 - 2703498 | 49881.0 |
| uncharacterized protein duf3810 | B0O44_10476 | Not Available | Positive | 2703498 - 2704616 | 43013.1 |
| molecular chaperone hsca | B0O44_10477 | Not Available | Positive | 2704723 - 2706579 | 68190.6 |
| zinc dependent phospholipase c | B0O44_10478 | Not Available | Positive | 2706623 - 2707579 | 37121.0 |
| membrane-associated protein | B0O44_10479 | Not Available | Negative | 2707576 - 2708235 | 24808.1 |
| uncharacterized protein duf4397 | B0O44_10480 | Not Available | Negative | 2708306 - 2708995 | 24761.5 |
| dna polymerase-3 subunit beta | B0O44_10481 | Not Available | Negative | 2709168 - 2710292 | 41392.4 |
| abc-2 type transport system permease protein | B0O44_10482 | Not Available | Negative | 2710327 - 2712024 | 63639.2 |
| abc-2 type transport system permease protein | B0O44_10483 | Not Available | Negative | 2711988 - 2712716 | 26907.4 |
| oprf-like membrane protein | B0O44_10484 | Not Available | Negative | 2712817 - 2713356 | 18927.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

