Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| septum formation protein | B0O44_10455 | Not Available | Negative | 2687307 - 2687876 | 21104.3 |
| uncharacterized protein duf4890 | B0O44_10456 | Not Available | Negative | 2687943 - 2688332 | 14151.0 |
| 3-deoxy-d-manno-octulosonate 8-phosphate phosphatase (kdo 8-p phosphatase) | B0O44_10457 | Not Available | Negative | 2688502 - 2689029 | 19315.3 |
| fes assembly protein iscx | B0O44_10458 | Not Available | Negative | 2689032 - 2689274 | 9813.28 |
| 2fe-2s ferredoxin | B0O44_10459 | Not Available | Negative | 2689298 - 2689630 | 12066.4 |
| putative short-subunit dehydrogenase-like oxidoreductase (duf2520 family) | B0O44_10460 | Not Available | Negative | 2689701 - 2690468 | 27939.7 |
| cytochrome c-type biogenesis protein ccmf | B0O44_10461 | Not Available | Negative | 2690465 - 2692939 | 93337.3 |
| cytochrome c-type biogenesis protein ccme | B0O44_10462 | Not Available | Negative | 2692944 - 2693354 | 15580.7 |
| peptide-methionine (s)-s-oxide reductase | B0O44_10463 | Not Available | Negative | 2693497 - 2694183 | 26104.5 |
| glutamate dehydrogenase/leucine dehydrogenase | B0O44_10464 | Not Available | Negative | 2694286 - 2695707 | 51674.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

