Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp phosphoribosyltransferase | B0O44_10435 | Not Available | Positive | 2669993 - 2670847 | 30895.7 |
| histidinol dehydrogenase | B0O44_10436 | Not Available | Positive | 2670907 - 2672193 | 46436.9 |
| histidinol-phosphate aminotransferase | B0O44_10437 | Not Available | Positive | 2672195 - 2673235 | 38775.6 |
| imidazoleglycerol-phosphate dehydratase | B0O44_10438 | Not Available | Positive | 2673241 - 2674377 | 42618.7 |
| glutamine amidotransferase | B0O44_10439 | Not Available | Positive | 2674378 - 2674971 | 22192.9 |
| 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase | B0O44_10440 | Not Available | Positive | 2674973 - 2675722 | 28060.1 |
| cyclase | B0O44_10441 | Not Available | Positive | 2675726 - 2676481 | 26729.2 |
| phosphoribosyl-atp pyrophosphatase /phosphoribosyl-amp cyclohydrolase | B0O44_10442 | Not Available | Positive | 2676486 - 2677076 | 21968.3 |
| wd domain g-beta repeat uncharacterized protein | B0O44_10443 | Not Available | Positive | 2677082 - 2677978 | 33942.8 |
| sh3 domain-containing protein | B0O44_10444 | Not Available | Negative | 2677983 - 2678765 | 29602.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

