Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| small conductance mechanosensitive channel | B0O44_10425 | Not Available | Positive | 2660604 - 2661446 | 30658.7 |
| hypothetical protein | B0O44_10426 | Not Available | Negative | 2661452 - 2661826 | 14627.0 |
| peroxiredoxin | B0O44_10427 | Not Available | Positive | 2661941 - 2662519 | 21659.4 |
| hxlr family transcriptional regulator | B0O44_10428 | Not Available | Negative | 2662559 - 2662936 | 14691.1 |
| hypothetical protein | B0O44_10429 | Not Available | Negative | 2663141 - 2663500 | 13621.5 |
| uncharacterized protein duf4199 | B0O44_10430 | Not Available | Negative | 2663606 - 2664181 | 21300.6 |
| hypothetical protein | B0O44_10431 | Not Available | Negative | 2664194 - 2664865 | 25603.9 |
| dihydroorotase | B0O44_10432 | Not Available | Negative | 2664858 - 2666120 | 45045.3 |
| putative membrane protein (tigr02226 family) | B0O44_10433 | Not Available | Negative | 2666117 - 2668156 | 77024.1 |
| l,d-transpeptidase-like protein | B0O44_10434 | Not Available | Negative | 2668169 - 2669740 | 60663.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

