Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-leu | Not Available | Not Available | Positive | 2651320 - 2651399 | Not Available |
| integral membrane protein | B0O44_10416 | Not Available | Negative | 2651459 - 2651770 | 11678.8 |
| molecular chaperone hscb | B0O44_10417 | Not Available | Negative | 2651835 - 2652353 | 20503.5 |
| regulator of sigma e protease | B0O44_10418 | Not Available | Negative | 2652356 - 2653693 | 49333.2 |
| 1-deoxy-d-xylulose 5-phosphate reductoisomerase | B0O44_10419 | Not Available | Negative | 2653736 - 2654896 | 42181.4 |
| gh3 auxin-responsive promoter | B0O44_10420 | Not Available | Negative | 2654934 - 2656439 | 56309.6 |
| hypothetical protein | B0O44_10421 | Not Available | Negative | 2656445 - 2657236 | 30042.8 |
| glycosyl transferase family 2 | B0O44_10422 | Not Available | Negative | 2657233 - 2658201 | 37188.4 |
| glycosyltransferase involved in cell wall biosynthesis | B0O44_10423 | Not Available | Negative | 2658205 - 2659158 | 36359.2 |
| peroxiredoxin | B0O44_10424 | Not Available | Negative | 2659329 - 2660489 | 44141.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

