Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding response ompr family regulator | B0O44_1045 | Not Available | Negative | 2641977 - 2642669 | 26379.5 |
| two-component system phosphate regulon sensor histidine kinase phor | B0O44_1046 | Not Available | Negative | 2642666 - 2644090 | 54114.4 |
| outer membrane receptor protein involved in fe transport | B0O44_1047 | Not Available | Positive | 2644234 - 2646621 | 90134.7 |
| ribosomal-protein-alanine n-acetyltransferase | B0O44_1048 | Not Available | Positive | 2646829 - 2647338 | 19504.7 |
| hypothetical protein | B0O44_1049 | Not Available | Positive | 2647766 - 2647900 | 5049.18 |
| helix-turn-helix protein | B0O44_10410 | Not Available | Positive | 2647866 - 2649110 | 47757.4 |
| hypothetical protein | B0O44_10411 | Not Available | Positive | 2649372 - 2649557 | 6745.27 |
| hypothetical protein | B0O44_10412 | Not Available | Positive | 2649597 - 2649725 | 4413.21 |
| hypothetical protein | B0O44_10413 | Not Available | Positive | 2649851 - 2650435 | 21612.2 |
| hypothetical protein | B0O44_10414 | Not Available | Positive | 2650447 - 2651208 | 28589.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

