Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fmn-dependent nadh-azoreductase | B0O44_101218 | Not Available | Positive | 277686 - 278303 | 22838.3 |
| lyttr family two component transcriptional regulator | B0O44_101219 | Not Available | Negative | 278361 - 279134 | 29194.4 |
| histidine kinase | B0O44_101220 | Not Available | Negative | 279103 - 280125 | 38557.7 |
| hypothetical protein | B0O44_101221 | Not Available | Negative | 280128 - 280799 | 25321.6 |
| uncharacterized protein (duf2141 family) | B0O44_101222 | Not Available | Positive | 281046 - 281495 | 17130.9 |
| arac-like dna-binding protein | B0O44_101223 | Not Available | Negative | 281505 - 282368 | 33283.1 |
| hypothetical protein | B0O44_101224 | Not Available | Negative | 282531 - 283733 | 45825.2 |
| cytosine/adenosine deaminase-related metal-dependent hydrolase | B0O44_101225 | Not Available | Positive | 283968 - 285314 | 48903.0 |
| Trna-ser | Not Available | Not Available | Positive | 285722 - 285809 | Not Available |
| membrane protein | B0O44_101227 | Not Available | Negative | 285920 - 286876 | 36547.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

