Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | B0O44_103644 | Not Available | Positive | 2611642 - 2612475 | 28946.6 |
| putative membrane protein | B0O44_103645 | Not Available | Positive | 2612486 - 2612887 | 14615.5 |
| cation diffusion facilitator family transporter | B0O44_103646 | Not Available | Negative | 2612877 - 2613791 | 33558.5 |
| fhs family l-fucose permease-like mfs transporter | B0O44_103647 | Not Available | Negative | 2613880 - 2615283 | 50496.5 |
| 3-hydroxyisobutyrate dehydrogenase | B0O44_103648 | Not Available | Negative | 2615389 - 2616237 | 30021.3 |
| zinc carboxypeptidase | B0O44_103649 | Not Available | Positive | 2616409 - 2619141 | 101399.0 |
| acetyl esterase/lipase | B0O44_103650 | Not Available | Positive | 2619225 - 2620139 | 33283.2 |
| rna polymerase sigma-70 factor (ecf subfamily) | B0O44_103651 | Not Available | Positive | 2620247 - 2620843 | 23391.1 |
| fecr family protein | B0O44_103652 | Not Available | Positive | 2620923 - 2621948 | 39134.0 |
| tonb-dependent receptor | B0O44_103653 | Not Available | Positive | 2622130 - 2625597 | 128253.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

