Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| metallo-beta-lactamase class b | B0O44_103634 | Not Available | Positive | 2601825 - 2602976 | 43037.8 |
| hypothetical protein | B0O44_103635 | Not Available | Negative | 2602960 - 2603949 | 36994.1 |
| ycei-like domain-containing protein | B0O44_103636 | Not Available | Negative | 2603949 - 2604494 | 20144.3 |
| hypothetical protein | B0O44_103637 | Not Available | Negative | 2604500 - 2604865 | 13059.7 |
| secreted repeat protein with y-x4-d motif | B0O44_103638 | Not Available | Negative | 2604873 - 2605751 | 31254.8 |
| rna polymerase sigma-70 factor (ecf subfamily) | B0O44_103639 | Not Available | Positive | 2605980 - 2606549 | 21676.8 |
| hypothetical protein | B0O44_103640 | Not Available | Positive | 2606536 - 2607777 | 45209.1 |
| hypothetical protein | B0O44_103641 | Not Available | Positive | 2607752 - 2607880 | 4959.26 |
| dipeptidyl aminopeptidase/acylaminoacyl peptidase | B0O44_103642 | Not Available | Negative | 2607877 - 2610777 | 107778.0 |
| dna-binding fadr family transcriptional regulator | B0O44_103643 | Not Available | Positive | 2610980 - 2611639 | 24858.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

