Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosomal l7/l12-like protein | B0O44_103624 | Not Available | Positive | 2588330 - 2588803 | 17162.8 |
| hypothetical protein | B0O44_103625 | Not Available | Positive | 2588989 - 2589255 | 9931.83 |
| sigma-70-like protein | B0O44_103626 | Not Available | Negative | 2589257 - 2589709 | 17370.3 |
| iron complex outermembrane receptor protein | B0O44_103627 | Not Available | Positive | 2590141 - 2592498 | 86147.6 |
| c-terminal processing protease ctpa/prc | B0O44_103628 | Not Available | Positive | 2592651 - 2594039 | 50785.6 |
| rna polymerase sigma-70 factor (ecf subfamily) | B0O44_103629 | Not Available | Positive | 2594107 - 2594664 | 21534.6 |
| fecr family protein | B0O44_103630 | Not Available | Positive | 2594790 - 2595773 | 37076.0 |
| tonb-dependent receptor | B0O44_103631 | Not Available | Positive | 2595901 - 2599215 | 125405.0 |
| hypothetical protein | B0O44_103632 | Not Available | Positive | 2599507 - 2600919 | 48462.3 |
| hypothetical protein | B0O44_103633 | Not Available | Positive | 2600999 - 2601745 | 28109.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

