Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | B0O44_103613 | Not Available | Negative | 2576637 - 2577572 | 35404.1 |
| arac-like dna-binding protein | B0O44_103614 | Not Available | Positive | 2577752 - 2578900 | 44156.3 |
| outer membrane receptor protein involved in fe transport | B0O44_103615 | Not Available | Positive | 2579036 - 2581426 | 89021.0 |
| peptidyl-dipeptidase dcp | B0O44_103616 | Not Available | Positive | 2581477 - 2583489 | 75643.7 |
| d-methionine transport system substrate-binding protein | B0O44_103617 | Not Available | Negative | 2583552 - 2584373 | 29912.1 |
| d-methionine transport system permease protein | B0O44_103618 | Not Available | Negative | 2584398 - 2585054 | 23377.7 |
| d-methionine transport system atp-binding protein | B0O44_103619 | Not Available | Negative | 2585047 - 2586078 | 37226.2 |
| endonuclease/exonuclease/phosphatase family metal-dependent hydrolase | B0O44_103621 | Not Available | Positive | 2586577 - 2587419 | 31964.7 |
| hypothetical protein | B0O44_103622 | Not Available | Positive | 2587636 - 2588205 | 21886.4 |
| hypothetical protein | B0O44_103623 | Not Available | Positive | 2588202 - 2588333 | 5153.37 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

