Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-linked susc/raga family outer membrane protein | B0O44_103603 | Not Available | Positive | 2557297 - 2560356 | 111981.0 |
| putative outer membrane starch-binding protein | B0O44_103604 | Not Available | Positive | 2560361 - 2562022 | 62034.9 |
| tonb-linked susc/raga family outer membrane protein | B0O44_103605 | Not Available | Positive | 2562063 - 2565149 | 113542.0 |
| putative outer membrane starch-binding protein | B0O44_103606 | Not Available | Positive | 2565169 - 2566911 | 64205.4 |
| parallel beta helix pectate lyase-like protein | B0O44_103607 | Not Available | Positive | 2566942 - 2568363 | 52778.3 |
| f5/8 type c domain-containing protein | B0O44_103608 | Not Available | Positive | 2568395 - 2569993 | 58758.1 |
| beta-galactosidase | B0O44_103609 | Not Available | Positive | 2569997 - 2572045 | 77571.6 |
| uncharacterized protein duf4962 | B0O44_103610 | Not Available | Positive | 2572212 - 2574092 | 69937.1 |
| glycosyl hydrolase family 88 | B0O44_103611 | Not Available | Positive | 2574116 - 2575351 | 47520.9 |
| hypothetical protein | B0O44_103612 | Not Available | Positive | 2575353 - 2576573 | 45154.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

