Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hxlr family transcriptional regulator | B0O44_103573 | Not Available | Positive | 2521485 - 2521844 | 13658.8 |
| lactoylglutathione lyase | B0O44_103574 | Not Available | Positive | 2521898 - 2522278 | 14407.0 |
| hypothetical protein | B0O44_103575 | Not Available | Negative | 2522295 - 2522468 | 6636.31 |
| hypothetical protein | B0O44_103576 | Not Available | Negative | 2522621 - 2522809 | 7271.71 |
| hypothetical protein | B0O44_103577 | Not Available | Positive | 2523011 - 2523646 | 24516.5 |
| glycosyl hydrolase family 18 (putative chitinase) | B0O44_103578 | Not Available | Negative | 2523648 - 2525696 | 77609.2 |
| uncharacterized protein duf4255 | B0O44_103579 | Not Available | Positive | 2525914 - 2526480 | 21561.0 |
| hypothetical protein | B0O44_103580 | Not Available | Positive | 2526480 - 2527310 | 32061.8 |
| hypothetical protein | B0O44_103581 | Not Available | Positive | 2527325 - 2529028 | 61879.6 |
| phage tail-like protein | B0O44_103582 | Not Available | Positive | 2529073 - 2529528 | 16781.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

