Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arac-like dna-binding protein | B0O44_101208 | Not Available | Negative | 268902 - 269741 | 32920.8 |
| thiol-disulfide isomerase/thioredoxin | B0O44_101209 | Not Available | Positive | 270098 - 271378 | 48085.5 |
| histidine kinase | B0O44_101210 | Not Available | Positive | 271430 - 272821 | 52821.2 |
| lyttr family two component transcriptional regulator | B0O44_101211 | Not Available | Positive | 272834 - 273586 | 28286.6 |
| Trna-ser | Not Available | Not Available | Positive | 273996 - 274083 | Not Available |
| rna polymerase sigma-70 factor (ecf subfamily) | B0O44_101213 | Not Available | Positive | 274437 - 274940 | 20076.2 |
| hypothetical protein | B0O44_101214 | Not Available | Positive | 274930 - 275550 | 23713.3 |
| stearoyl-coa desaturase (delta-9 desaturase) | B0O44_101215 | Not Available | Negative | 275516 - 276646 | 44164.1 |
| hypothetical protein | B0O44_101216 | Not Available | Negative | 276895 - 277299 | 14982.2 |
| hypothetical protein | B0O44_101217 | Not Available | Negative | 277482 - 277664 | 6787.91 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

