Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| zinc protease | B0O44_103551 | Not Available | Positive | 2499373 - 2502228 | 106523.0 |
| putative transposase/invertase (tigr01784 family) | B0O44_103552 | Not Available | Positive | 2502431 - 2502868 | 16844.0 |
| hypothetical protein | B0O44_103553 | Not Available | Positive | 2502944 - 2503747 | 31310.6 |
| hypothetical protein | B0O44_103554 | Not Available | Negative | 2503813 - 2504568 | 28389.4 |
| dihydrofolate reductase | B0O44_103555 | Not Available | Negative | 2504663 - 2505193 | 19546.5 |
| tetr family transcriptional regulator | B0O44_103556 | Not Available | Positive | 2505322 - 2505924 | 22787.1 |
| arac-like dna-binding protein | B0O44_103557 | Not Available | Negative | 2505934 - 2506734 | 31092.8 |
| outer membrane protein tolc | B0O44_103558 | Not Available | Positive | 2506825 - 2508141 | 49647.9 |
| membrane fusion protein (multidrug efflux system) | B0O44_103559 | Not Available | Positive | 2508152 - 2509213 | 39077.2 |
| mfs transporter | B0O44_103560 | Not Available | Positive | 2509206 - 2510795 | 59742.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

