Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative iron-regulated membrane protein | B0O44_103531 | Not Available | Positive | 2477296 - 2478834 | 57714.4 |
| acr3 family arsenite transporter | B0O44_103532 | Not Available | Negative | 2478806 - 2479882 | 39453.9 |
| arsenate reductase | B0O44_103533 | Not Available | Negative | 2479894 - 2480313 | 15492.2 |
| hypothetical protein | B0O44_103534 | Not Available | Negative | 2480325 - 2480774 | 17056.6 |
| helix-turn-helix protein | B0O44_103535 | Not Available | Negative | 2480811 - 2481140 | 11802.5 |
| hypothetical protein | B0O44_103536 | Not Available | Positive | 2481343 - 2481681 | 12400.0 |
| rna polymerase sigma-70 factor (ecf subfamily) | B0O44_103537 | Not Available | Positive | 2481681 - 2482937 | 47756.3 |
| rlob-like protein | B0O44_103538 | Not Available | Negative | 2482934 - 2483551 | 24103.8 |
| hypothetical protein | B0O44_103539 | Not Available | Negative | 2483562 - 2484860 | 49619.1 |
| hypothetical protein | B0O44_103540 | Not Available | Negative | 2485015 - 2486511 | 56734.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

