Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative tic20 family protein | B0O44_103521 | Not Available | Negative | 2469935 - 2470495 | 21145.6 |
| hypothetical protein | B0O44_103522 | Not Available | Negative | 2470563 - 2470772 | 7971.48 |
| carboxypeptidase-like protein | B0O44_103523 | Not Available | Positive | 2471297 - 2471752 | 17348.6 |
| hypothetical protein | B0O44_103524 | Not Available | Positive | 2471827 - 2472273 | 17251.7 |
| hypothetical protein | B0O44_103525 | Not Available | Positive | 2472501 - 2473205 | 27030.2 |
| putative lipoprotein nlpe involved in copper resistance | B0O44_103526 | Not Available | Positive | 2473349 - 2473801 | 16492.8 |
| trans-aconitate 2-methyltransferase | B0O44_103527 | Not Available | Positive | 2473803 - 2474567 | 29403.6 |
| uncharacterized protein ydei (yjbr/cyay-like superfamily) | B0O44_103528 | Not Available | Negative | 2474564 - 2475142 | 22077.3 |
| hypothetical protein | B0O44_103529 | Not Available | Negative | 2475233 - 2476420 | 45151.6 |
| acetyltransferase (gnat) family protein | B0O44_103530 | Not Available | Negative | 2476504 - 2477076 | 21777.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

