Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | B0O44_103511 | Not Available | Positive | 2457156 - 2458583 | 52371.2 |
| outer membrane receptor for ferrienterochelin and colicin | B0O44_103512 | Not Available | Positive | 2458667 - 2460994 | 86949.0 |
| uncharacterized protein duf4249 | B0O44_103513 | Not Available | Positive | 2461000 - 2461809 | 29894.6 |
| dinb family protein | B0O44_103514 | Not Available | Positive | 2461824 - 2462318 | 18762.4 |
| hypothetical protein | B0O44_103515 | Not Available | Negative | 2462369 - 2462740 | 13343.4 |
| rna polymerase sigma-70 factor (ecf subfamily) | B0O44_103516 | Not Available | Positive | 2462949 - 2463521 | 21986.8 |
| rna polymerase sigma-70 factor (ecf subfamily) | B0O44_103517 | Not Available | Positive | 2463678 - 2464208 | 21050.8 |
| fecr family protein | B0O44_103518 | Not Available | Positive | 2464268 - 2465287 | 38129.4 |
| carboxypeptidase family protein | B0O44_103519 | Not Available | Positive | 2465381 - 2468608 | 119048.0 |
| cubico group peptidase (beta-lactamase class c family) | B0O44_103520 | Not Available | Negative | 2468659 - 2469813 | 42757.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

