Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane protein with beta-barrel domain | B0O44_103501 | Not Available | Positive | 2448263 - 2448937 | 24952.9 |
| selenocysteine lyase/cysteine desulfurase | B0O44_103502 | Not Available | Negative | 2449121 - 2450197 | 40624.6 |
| nucleotide-binding universal stress uspa family protein | B0O44_103503 | Not Available | Negative | 2450304 - 2451158 | 32288.3 |
| dna-binding marr family transcriptional regulator | B0O44_103504 | Not Available | Negative | 2451171 - 2451638 | 18075.1 |
| hica-like toxin of hicab toxin-antitoxin system | B0O44_103505 | Not Available | Positive | 2451832 - 2451981 | 5437.7 |
| hypothetical protein | B0O44_103506 | Not Available | Positive | 2452025 - 2452417 | 14437.5 |
| hypothetical protein | B0O44_103507 | Not Available | Positive | 2452554 - 2452961 | 14847.0 |
| hexosaminidase | B0O44_103508 | Not Available | Positive | 2453028 - 2455334 | 86238.1 |
| hypothetical protein | B0O44_103509 | Not Available | Positive | 2455418 - 2455801 | 13707.2 |
| hypothetical protein | B0O44_103510 | Not Available | Negative | 2455817 - 2457010 | 43844.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

