Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| susd-like starch-binding protein associating with outer membrane | B0O44_103481 | Not Available | Positive | 2417145 - 2418635 | 55329.7 |
| small-conductance mechanosensitive channel | B0O44_103482 | Not Available | Negative | 2418655 - 2421006 | 88361.5 |
| dna-binding lrp family transcriptional regulator | B0O44_103483 | Not Available | Negative | 2421082 - 2421567 | 18118.2 |
| emrb/qaca subfamily drug resistance transporter | B0O44_103484 | Not Available | Positive | 2421694 - 2423049 | 48101.9 |
| glutamate/tyrosine decarboxylase-like plp-dependent enzyme | B0O44_103485 | Not Available | Negative | 2423131 - 2424585 | 53535.6 |
| septal ring factor envc (amia/amib activator) | B0O44_103486 | Not Available | Negative | 2424642 - 2425988 | 50114.5 |
| zinc protease | B0O44_103487 | Not Available | Positive | 2426158 - 2429031 | 107030.0 |
| ubiquitin-hydrolase zn-finger-containing protein | B0O44_103488 | Not Available | Negative | 2429085 - 2429357 | 10370.1 |
| hypothetical protein | B0O44_103489 | Not Available | Negative | 2429368 - 2429607 | 8682.5 |
| lmbe family n-acetylglucosaminyl deacetylase | B0O44_103490 | Not Available | Positive | 2429735 - 2430376 | 24439.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

