Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | B0O44_103470 | Not Available | Negative | 2400040 - 2400906 | 33304.2 |
| duf218 domain-containing protein | B0O44_103471 | Not Available | Negative | 2400909 - 2402162 | 46817.4 |
| tonb-linked susc/raga family outer membrane protein | B0O44_103472 | Not Available | Positive | 2402421 - 2405693 | 118735.0 |
| putative outer membrane starch-binding protein | B0O44_103473 | Not Available | Positive | 2405704 - 2407233 | 56928.6 |
| putative alpha-1,2-mannosidase | B0O44_103474 | Not Available | Positive | 2407303 - 2409378 | 78380.7 |
| glycerophosphoryl diester phosphodiesterase | B0O44_103475 | Not Available | Positive | 2409387 - 2410295 | 34293.5 |
| hypothetical protein | B0O44_103476 | Not Available | Negative | 2410459 - 2410674 | 8264.78 |
| peroxiredoxin | B0O44_103478 | Not Available | Positive | 2411058 - 2411648 | 21776.5 |
| n-acetylated-alpha-linked acidic dipeptidase | B0O44_103479 | Not Available | Positive | 2411730 - 2413958 | 81364.3 |
| tonb-linked susc/raga family outer membrane protein | B0O44_103480 | Not Available | Positive | 2413998 - 2417123 | 113740.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

