Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidoglycan/lps o-acetylase oafa/yrhl | B0O44_101198 | Not Available | Negative | 258644 - 259789 | 43575.0 |
| arac-like dna-binding protein | B0O44_101199 | Not Available | Positive | 260109 - 260963 | 32906.0 |
| siderophore-interacting protein | B0O44_101200 | Not Available | Positive | 261104 - 261832 | 27528.1 |
| hypothetical protein | B0O44_101201 | Not Available | Positive | 261900 - 262886 | 36451.1 |
| pimeloyl-acp methyl ester carboxylesterase | B0O44_101202 | Not Available | Positive | 263041 - 263856 | 29854.1 |
| uncharacterized protein duf1963 | B0O44_101203 | Not Available | Negative | 263931 - 264518 | 22256.2 |
| pimeloyl-acp methyl ester carboxylesterase | B0O44_101204 | Not Available | Negative | 264741 - 265880 | 43081.4 |
| pimeloyl-acp methyl ester carboxylesterase | B0O44_101205 | Not Available | Negative | 266045 - 266743 | 25823.7 |
| putative mfs family arabinose efflux permease | B0O44_101206 | Not Available | Negative | 266740 - 267951 | 43615.9 |
| l-ascorbate metabolism protein ulag (beta-lactamase superfamily) | B0O44_101207 | Not Available | Negative | 267960 - 268766 | 29941.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

