Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative o-methyltransferase yrrm | B0O44_103450 | Not Available | Positive | 2382070 - 2382660 | 22235.9 |
| hypothetical protein | B0O44_103451 | Not Available | Positive | 2382688 - 2383491 | 29850.2 |
| putative gh43/duf377 family glycosyl hydrolase | B0O44_103452 | Not Available | Positive | 2383478 - 2384551 | 40088.1 |
| hypothetical protein | B0O44_103453 | Not Available | Negative | 2384548 - 2384904 | 14106.7 |
| hypothetical protein | B0O44_103454 | Not Available | Negative | 2385044 - 2385259 | 8530.27 |
| outer membrane protein tolc | B0O44_103455 | Not Available | Negative | 2385283 - 2386572 | 47819.0 |
| dha2 family multidrug resistance protein | B0O44_103456 | Not Available | Negative | 2386591 - 2388171 | 57267.7 |
| membrane fusion protein (multidrug efflux system) | B0O44_103457 | Not Available | Negative | 2388181 - 2389230 | 37642.7 |
| dna-binding marr family transcriptional regulator | B0O44_103458 | Not Available | Positive | 2389368 - 2389829 | 17750.4 |
| dhna family fructose-bisphosphate aldolase class ia | B0O44_103459 | Not Available | Negative | 2389885 - 2390943 | 38606.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

