Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | B0O44_103430 | Not Available | Negative | 2363950 - 2364783 | 30964.4 |
| tonb-dependent receptor-like protein | B0O44_103431 | Not Available | Negative | 2364788 - 2367358 | 97180.6 |
| fecr family protein | B0O44_103432 | Not Available | Negative | 2367362 - 2368372 | 38606.1 |
| rna polymerase sigma-70 factor (ecf subfamily) | B0O44_103433 | Not Available | Negative | 2368407 - 2368982 | 22857.0 |
| chrd domain-containing protein | B0O44_103434 | Not Available | Positive | 2369285 - 2369731 | 15971.2 |
| hypothetical protein | B0O44_103435 | Not Available | Positive | 2369776 - 2369979 | 7096.6 |
| hypothetical protein | B0O44_103436 | Not Available | Positive | 2370099 - 2370404 | 11959.2 |
| s1/p1 nuclease | B0O44_103437 | Not Available | Negative | 2370506 - 2371642 | 42137.6 |
| glyoxalase-like protein | B0O44_103438 | Not Available | Positive | 2371805 - 2372155 | 13182.8 |
| putative phosphoesterase | B0O44_103439 | Not Available | Negative | 2372206 - 2372946 | 27679.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

