Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyl hydrolase family 18 (putative chitinase) | B0O44_103420 | Not Available | Positive | 2352667 - 2353596 | 34720.6 |
| hypothetical protein | B0O44_103421 | Not Available | Negative | 2353615 - 2353881 | 9882.06 |
| ycii-related domain-containing protein | B0O44_103422 | Not Available | Negative | 2353917 - 2354252 | 12343.7 |
| hypothetical protein | B0O44_103423 | Not Available | Negative | 2354269 - 2354859 | 22759.5 |
| antitoxin component ywqk of ywqjk toxin-antitoxin module | B0O44_103424 | Not Available | Positive | 2354928 - 2355548 | 23600.8 |
| signal transduction histidine kinase | B0O44_103425 | Not Available | Positive | 2355629 - 2357599 | 74769.2 |
| rnd family efflux transporter mfp subunit | B0O44_103426 | Not Available | Negative | 2357656 - 2358738 | 39228.1 |
| multidrug efflux pump subunit acrb | B0O44_103427 | Not Available | Negative | 2358728 - 2361988 | 119150.0 |
| outer membrane protein tolc | B0O44_103428 | Not Available | Negative | 2362000 - 2363358 | 50684.4 |
| hypothetical protein | B0O44_103429 | Not Available | Negative | 2363474 - 2363809 | 12866.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

