Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix protein | B0O44_103410 | Not Available | Negative | 2343852 - 2344934 | 41473.1 |
| hypothetical protein | B0O44_103411 | Not Available | Negative | 2345034 - 2346188 | 45339.5 |
| aspartyl protease | B0O44_103412 | Not Available | Negative | 2346260 - 2347432 | 43897.3 |
| hypothetical protein | B0O44_103413 | Not Available | Negative | 2347762 - 2347980 | 8134.51 |
| ligand-binding srpbcc domain-containing protein | B0O44_103414 | Not Available | Positive | 2348139 - 2348597 | 17200.0 |
| putative metalloprotease with pdz domain | B0O44_103415 | Not Available | Positive | 2348703 - 2350562 | 69875.3 |
| hypothetical protein | B0O44_103416 | Not Available | Positive | 2350743 - 2351108 | 14330.0 |
| hypothetical protein | B0O44_103417 | Not Available | Positive | 2351195 - 2351419 | 8356.71 |
| ectoine hydroxylase-related dioxygenase (phytanoyl-coa dioxygenase family) | B0O44_103418 | Not Available | Negative | 2351434 - 2352189 | 29519.2 |
| hypothetical protein | B0O44_103419 | Not Available | Positive | 2352254 - 2352670 | 15524.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

