Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cu(i)/ag(i) efflux system membrane protein cusa/sila | B0O44_103400 | Not Available | Negative | 2330260 - 2332197 | 72019.2 |
| czca family heavy metal efflux pump | B0O44_103401 | Not Available | Negative | 2332194 - 2333492 | 48255.7 |
| copper chaperone copz | B0O44_103402 | Not Available | Negative | 2333545 - 2333907 | 12900.6 |
| hypothetical protein | B0O44_103403 | Not Available | Negative | 2334008 - 2334403 | 14575.8 |
| arac-like dna-binding protein | B0O44_103404 | Not Available | Positive | 2334528 - 2335685 | 44123.5 |
| peptidase c10-like protein | B0O44_103405 | Not Available | Positive | 2335753 - 2336586 | 31855.2 |
| gamma-glutamyltranspeptidase/glutathione hydrolase | B0O44_103406 | Not Available | Negative | 2336592 - 2338481 | 69051.8 |
| arac family transcriptional regulator | B0O44_103407 | Not Available | Positive | 2338685 - 2339485 | 30473.3 |
| peptidase s41-like protein | B0O44_103408 | Not Available | Positive | 2339558 - 2341321 | 67051.1 |
| outer membrane receptor protein involved in fe transport | B0O44_103409 | Not Available | Negative | 2341360 - 2343756 | 90023.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

