Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein yeao (duf488 family) | B0O44_103390 | Not Available | Negative | 2320952 - 2321308 | 13963.9 |
| 3',5'-cyclic amp phosphodiesterase cpda | B0O44_103391 | Not Available | Positive | 2321502 - 2322347 | 31574.4 |
| hypothetical protein | B0O44_103392 | Not Available | Positive | 2322459 - 2323433 | 36662.9 |
| histidine kinase | B0O44_103393 | Not Available | Positive | 2323511 - 2324545 | 38535.0 |
| lyttr family two component transcriptional regulator | B0O44_103394 | Not Available | Positive | 2324526 - 2325290 | 29087.2 |
| suppressor of fused protein sufu | B0O44_103395 | Not Available | Positive | 2325332 - 2325973 | 24559.7 |
| uncharacterized protein duf3347 | B0O44_103396 | Not Available | Negative | 2326025 - 2326576 | 19757.8 |
| cu(i)/ag(i) efflux system membrane fusion protein | B0O44_103397 | Not Available | Negative | 2326597 - 2327820 | 44877.9 |
| multidrug efflux pump subunit acra (membrane-fusion protein) | B0O44_103398 | Not Available | Negative | 2327825 - 2329048 | 44543.9 |
| outer membrane protein tolc | B0O44_103399 | Not Available | Negative | 2329026 - 2330294 | 48382.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

