Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glpgli family protein | B0O44_103380 | Not Available | Positive | 2305707 - 2306369 | 24007.2 |
| h+/cl- antiporter clca | B0O44_103381 | Not Available | Negative | 2306416 - 2307900 | 53538.9 |
| abc-type lipoprotein release transport system permease subunit | B0O44_103382 | Not Available | Positive | 2308098 - 2310554 | 92501.6 |
| dna-binding transcriptional lysr family regulator | B0O44_103383 | Not Available | Negative | 2310557 - 2311441 | 34087.5 |
| histidine ammonia-lyase | B0O44_103384 | Not Available | Positive | 2311519 - 2313090 | 56636.9 |
| imidazolonepropionase | B0O44_103385 | Not Available | Positive | 2313094 - 2314341 | 44372.3 |
| urocanate hydratase | B0O44_103386 | Not Available | Positive | 2314355 - 2316355 | 74302.6 |
| iron complex outermembrane receptor protein | B0O44_103387 | Not Available | Positive | 2316521 - 2318881 | 88461.0 |
| na+/h+ antiporter nhad/arsenite permease-like protein | B0O44_103388 | Not Available | Positive | 2318967 - 2320235 | 45358.4 |
| hypothetical protein | B0O44_103389 | Not Available | Negative | 2320315 - 2320782 | 16751.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

