Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dass family divalent anion:na+ symporter | B0O44_101188 | Not Available | Positive | 248653 - 250083 | 51824.2 |
| succinate dehydrogenase / fumarate reductase cytochrome b subunit | B0O44_101189 | Not Available | Positive | 250097 - 250765 | 25856.0 |
| succinate dehydrogenase subunit a | B0O44_101190 | Not Available | Positive | 250768 - 252684 | 70794.1 |
| succinate dehydrogenase / fumarate reductase iron-sulfur subunit | B0O44_101191 | Not Available | Positive | 252715 - 253458 | 27354.0 |
| 5'(3')-deoxyribonucleotidase | B0O44_101192 | Not Available | Negative | 253501 - 254052 | 21132.4 |
| deor family transcriptional regulator | B0O44_101193 | Not Available | Positive | 254179 - 254928 | 27492.4 |
| response regulator receiver domain-containing protein | B0O44_101194 | Not Available | Positive | 255030 - 255404 | 14470.4 |
| hypothetical protein | B0O44_101195 | Not Available | Positive | 255388 - 257622 | 84750.0 |
| hypothetical protein | B0O44_101196 | Not Available | Negative | 257650 - 257775 | 4901.96 |
| arac-like dna-binding protein | B0O44_101197 | Not Available | Positive | 257844 - 258647 | 31480.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

