Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha-glucosidase (family gh31 glycosyl hydrolase) | B0O44_10111 | Not Available | Negative | 17774 - 21589 | 141511.0 |
| fecr family protein | B0O44_10112 | Not Available | Positive | 21885 - 23000 | 41381.4 |
| tonb-linked susc/raga family outer membrane protein | B0O44_10113 | Not Available | Positive | 23116 - 26619 | 132014.0 |
| susd-like starch-binding protein associating with outer membrane | B0O44_10114 | Not Available | Positive | 26631 - 28010 | 52149.3 |
| thioredoxin-like protein | B0O44_10115 | Not Available | Positive | 28032 - 29483 | 55876.6 |
| hypothetical protein | B0O44_10116 | Not Available | Negative | 29536 - 29832 | 10236.1 |
| hypothetical protein | B0O44_10117 | Not Available | Negative | 29966 - 30259 | 10925.0 |
| methylamine utilization protein maue | B0O44_10118 | Not Available | Negative | 30289 - 30741 | 17044.4 |
| methylamine utilization protein maue | B0O44_10119 | Not Available | Negative | 31231 - 31683 | 16777.9 |
| hypothetical protein | B0O44_10120 | Not Available | Negative | 31833 - 32957 | 43349.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

