Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dihydrolipoamide dehydrogenase | B0O44_103350 | Not Available | Negative | 2269210 - 2270613 | 50164.5 |
| uncharacterized protein (tigr00369 family) | B0O44_103351 | Not Available | Negative | 2270626 - 2271105 | 17592.4 |
| membrane-associated phospholipid phosphatase | B0O44_103352 | Not Available | Positive | 2271323 - 2272021 | 26217.0 |
| hypothetical protein | B0O44_103353 | Not Available | Negative | 2272011 - 2272328 | 11345.0 |
| ribonucleoside-diphosphate reductase beta chain | B0O44_103354 | Not Available | Negative | 2272628 - 2273617 | 37919.2 |
| ribonucleoside-diphosphate reductase alpha chain | B0O44_103355 | Not Available | Negative | 2273630 - 2275720 | 79902.6 |
| protein involved in ribonucleotide reduction | B0O44_103356 | Not Available | Negative | 2275717 - 2276088 | 13977.8 |
| thioredoxin 1 | B0O44_103357 | Not Available | Negative | 2276099 - 2276335 | 9060.16 |
| alkylation response protein aidb-like acyl-coa dehydrogenase | B0O44_103358 | Not Available | Negative | 2276514 - 2278022 | 56259.1 |
| hypothetical protein | B0O44_103359 | Not Available | Positive | 2278155 - 2278475 | 12385.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

