Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptide-methionine (r)-s-oxide reductase | B0O44_103330 | Not Available | Positive | 2243809 - 2244318 | 19080.5 |
| cbs domain protein | B0O44_103331 | Not Available | Positive | 2244413 - 2244736 | 12229.1 |
| calcineurin-like phosphoesterase family protein | B0O44_103332 | Not Available | Positive | 2244917 - 2246095 | 43089.1 |
| hypothetical protein | B0O44_103333 | Not Available | Negative | 2246171 - 2246851 | 26313.9 |
| hypothetical protein | B0O44_103334 | Not Available | Positive | 2247032 - 2247940 | 34473.4 |
| hypothetical protein | B0O44_103335 | Not Available | Positive | 2247927 - 2248364 | 16870.5 |
| arac-like dna-binding protein | B0O44_103336 | Not Available | Positive | 2248368 - 2248733 | 13692.7 |
| nad(p)-dependent dehydrogenase (short-subunit alcohol dehydrogenase family) | B0O44_103337 | Not Available | Positive | 2248814 - 2249569 | 26872.9 |
| outer membrane protein ompa-like peptidoglycan-associated protein | B0O44_103338 | Not Available | Positive | 2249892 - 2251199 | 45219.4 |
| 7tmr-dism extracellular protein 2 | B0O44_103339 | Not Available | Positive | 2251355 - 2253142 | 68757.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

