Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix protein | B0O44_103320 | Not Available | Negative | 2236668 - 2237465 | 30849.2 |
| putative glyoxalase superfamily protein phnb | B0O44_103321 | Not Available | Positive | 2237544 - 2237936 | 14420.3 |
| hypothetical protein | B0O44_103322 | Not Available | Positive | 2238052 - 2238552 | 18916.7 |
| rimj/riml family protein n-acetyltransferase | B0O44_103323 | Not Available | Positive | 2238665 - 2239267 | 23020.5 |
| hypothetical protein | B0O44_103324 | Not Available | Negative | 2239338 - 2239805 | 16939.8 |
| chloramphenicol o-acetyltransferase type a | B0O44_103325 | Not Available | Negative | 2239979 - 2240638 | 26091.0 |
| surface polysaccharide o-acyltransferase-like enzyme | B0O44_103326 | Not Available | Negative | 2240666 - 2241847 | 45036.2 |
| dna-binding transcriptional arsr family regulator | B0O44_103327 | Not Available | Positive | 2242085 - 2242390 | 12001.3 |
| uncharacterized protein yndb with ahsa1/start domain | B0O44_103328 | Not Available | Positive | 2242403 - 2242900 | 18744.9 |
| peptide-methionine (s)-s-oxide reductase | B0O44_103329 | Not Available | Positive | 2243166 - 2243798 | 24018.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

