Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | B0O44_103310 | Not Available | Negative | 2229532 - 2230401 | 32181.8 |
| hypothetical protein | B0O44_103311 | Not Available | Negative | 2230627 - 2230968 | 12909.2 |
| uncharacterized protein yndb with ahsa1/start domain | B0O44_103312 | Not Available | Negative | 2231142 - 2231618 | 17781.1 |
| dna-binding transcriptional arsr family regulator | B0O44_103313 | Not Available | Negative | 2231608 - 2231940 | 12840.4 |
| putative iron-regulated membrane protein | B0O44_103314 | Not Available | Positive | 2232167 - 2233246 | 40941.4 |
| small multidrug resistance pump | B0O44_103315 | Not Available | Positive | 2233335 - 2233667 | 11932.3 |
| fucose permease | B0O44_103316 | Not Available | Positive | 2233790 - 2234965 | 41309.0 |
| rimj/riml family protein n-acetyltransferase | B0O44_103317 | Not Available | Positive | 2235018 - 2235536 | 20143.4 |
| dna-3-methyladenine glycosylase ii | B0O44_103318 | Not Available | Positive | 2235521 - 2236159 | 24480.9 |
| hypothetical protein | B0O44_103319 | Not Available | Negative | 2236132 - 2236602 | 17908.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

