Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein duf4269 | B0O44_103300 | Not Available | Positive | 2222233 - 2222769 | 20123.3 |
| ca2+:h+ antiporter | B0O44_103301 | Not Available | Positive | 2222855 - 2223937 | 37822.0 |
| hypothetical protein | B0O44_103302 | Not Available | Negative | 2223951 - 2224313 | 14194.9 |
| hypothetical protein | B0O44_103303 | Not Available | Positive | 2224443 - 2224856 | 15501.2 |
| lyttr family two component transcriptional regulator | B0O44_103304 | Not Available | Negative | 2224885 - 2225589 | 27462.9 |
| ghkl domain-containing protein | B0O44_103305 | Not Available | Negative | 2225576 - 2226580 | 38973.1 |
| luxr family two component transcriptional regulator | B0O44_103306 | Not Available | Positive | 2226865 - 2227509 | 23838.2 |
| pap2 superfamily protein | B0O44_103307 | Not Available | Negative | 2227619 - 2228413 | 29330.2 |
| hypothetical protein | B0O44_103308 | Not Available | Negative | 2228410 - 2228586 | 6904.47 |
| hypothetical protein | B0O44_103309 | Not Available | Negative | 2229193 - 2229531 | 12648.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

