Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-linked susc/raga family outer membrane protein | B0O44_103280 | Not Available | Positive | 2199814 - 2202888 | 111400.0 |
| susd-like starch-binding protein associating with outer membrane | B0O44_103281 | Not Available | Positive | 2202927 - 2204282 | 49200.8 |
| glycosyl hydrolase family 114 | B0O44_103282 | Not Available | Positive | 2204385 - 2205239 | 32149.2 |
| helix-turn-helix protein | B0O44_103283 | Not Available | Negative | 2205321 - 2206235 | 34888.8 |
| nadp-dependent 3-hydroxy acid dehydrogenase ydfg | B0O44_103284 | Not Available | Negative | 2206262 - 2207059 | 29370.3 |
| mgt family glycosyltransferase | B0O44_103285 | Not Available | Negative | 2207171 - 2208370 | 44126.3 |
| putative iron-dependent peroxidase | B0O44_103286 | Not Available | Negative | 2208432 - 2209409 | 36385.1 |
| alkylphosphonate utilization operon protein phna | B0O44_103287 | Not Available | Positive | 2209446 - 2210066 | 23425.2 |
| snoal-like protein | B0O44_103288 | Not Available | Negative | 2210083 - 2210445 | 13799.4 |
| histidine kinase | B0O44_103289 | Not Available | Positive | 2210657 - 2211694 | 40002.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

