Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix protein | B0O44_103270 | Not Available | Positive | 2183012 - 2183830 | 31128.7 |
| 2-polyprenyl-6-methoxyphenol hydroxylase-like fad-dependent oxidoreductase | B0O44_103271 | Not Available | Positive | 2183872 - 2185434 | 56704.3 |
| glycerophosphoryl diester phosphodiesterase | B0O44_103272 | Not Available | Negative | 2185503 - 2186345 | 31181.0 |
| calcineurin-like phosphoesterase family protein | B0O44_103273 | Not Available | Negative | 2186348 - 2187610 | 47840.3 |
| susd-like starch-binding protein associating with outer membrane | B0O44_103274 | Not Available | Negative | 2187660 - 2189132 | 55003.5 |
| tonb-linked susc/raga family outer membrane protein | B0O44_103275 | Not Available | Negative | 2189144 - 2192596 | 127066.0 |
| fecr family protein | B0O44_103276 | Not Available | Negative | 2192693 - 2193721 | 38516.1 |
| rna polymerase sigma-70 factor (ecf subfamily) | B0O44_103277 | Not Available | Negative | 2193813 - 2194370 | 21977.2 |
| tonb-linked susc/raga family outer membrane protein | B0O44_103278 | Not Available | Positive | 2194674 - 2197697 | 110967.0 |
| putative outer membrane starch-binding protein | B0O44_103279 | Not Available | Positive | 2197725 - 2199149 | 53584.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

