Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| n-acetylmuramoyl-l-alanine amidase | B0O44_103260 | Not Available | Positive | 2169909 - 2171363 | 54587.1 |
| outer membrane receptor protein involved in fe transport | B0O44_103261 | Not Available | Positive | 2171381 - 2173573 | 83618.9 |
| hypothetical protein | B0O44_103262 | Not Available | Positive | 2173674 - 2174540 | 30715.8 |
| hypothetical protein | B0O44_103263 | Not Available | Positive | 2174558 - 2175289 | 28410.8 |
| l-ascorbate metabolism protein ulag (beta-lactamase superfamily) | B0O44_103264 | Not Available | Positive | 2175472 - 2176569 | 41334.8 |
| arac-like dna-binding protein | B0O44_103265 | Not Available | Positive | 2176566 - 2177360 | 30549.9 |
| tetr family transcriptional regulator | B0O44_103266 | Not Available | Positive | 2177535 - 2178143 | 22927.0 |
| putative mfs family arabinose efflux permease | B0O44_103267 | Not Available | Positive | 2178233 - 2179492 | 46167.6 |
| nicotinamidase-related amidase | B0O44_103268 | Not Available | Positive | 2179512 - 2180075 | 20606.9 |
| pyruvate,water dikinase | B0O44_103269 | Not Available | Negative | 2180129 - 2182816 | 99555.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

