Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ix secretion system porp/sprf family membrane protein | B0O44_101178 | Not Available | Negative | 235680 - 236687 | 37220.4 |
| putative repeat protein (tigr01451 family)/gliding motility-associated-like protein | B0O44_101179 | Not Available | Negative | 236760 - 237713 | 34944.4 |
| hypothetical protein | B0O44_101180 | Not Available | Negative | 237747 - 238436 | 23901.9 |
| ig-like protein group 2 | B0O44_101181 | Not Available | Negative | 238455 - 241157 | 89812.0 |
| 6-phosphogluconolactonase | B0O44_101182 | Not Available | Negative | 241527 - 242282 | 28249.0 |
| glucose-6-phosphate 1-dehydrogenase | B0O44_101183 | Not Available | Negative | 242286 - 243797 | 57597.9 |
| 6-phosphogluconate dehydrogenase | B0O44_101184 | Not Available | Negative | 243915 - 245327 | 52243.8 |
| polyphosphate glucokinase | B0O44_101185 | Not Available | Negative | 245371 - 246129 | 27620.4 |
| alpha-beta hydrolase superfamily lysophospholipase | B0O44_101186 | Not Available | Positive | 246278 - 247258 | 37393.1 |
| phosphate-selective porin o/p | B0O44_101187 | Not Available | Positive | 247383 - 248630 | 46875.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

