Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yarhg domain-containing protein | B0O44_103240 | Not Available | Positive | 2148252 - 2148968 | 27955.3 |
| hypothetical protein | B0O44_103241 | Not Available | Positive | 2149000 - 2149941 | 36276.1 |
| sodium/proton antiporter (cpa1 family) | B0O44_103242 | Not Available | Positive | 2149923 - 2151551 | 60161.1 |
| hypothetical protein | B0O44_103243 | Not Available | Positive | 2151594 - 2152520 | 35012.3 |
| hypothetical protein | B0O44_103244 | Not Available | Negative | 2152546 - 2153133 | 21831.1 |
| helix-turn-helix protein | B0O44_103245 | Not Available | Positive | 2153296 - 2154144 | 32448.0 |
| peptidase s41-like protein | B0O44_103246 | Not Available | Positive | 2154207 - 2155634 | 53588.4 |
| arac-like dna-binding protein | B0O44_103247 | Not Available | Negative | 2155652 - 2156623 | 36966.3 |
| nadp-dependent 3-hydroxy acid dehydrogenase ydfg | B0O44_103248 | Not Available | Negative | 2156660 - 2157559 | 32459.5 |
| hypothetical protein | B0O44_103249 | Not Available | Negative | 2157703 - 2158449 | 28605.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

