Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-linked susc/raga family outer membrane protein | B0O44_103220 | Not Available | Positive | 2121399 - 2124287 | 106614.0 |
| putative outer membrane starch-binding protein | B0O44_103221 | Not Available | Positive | 2124299 - 2126014 | 64084.9 |
| uncharacterized protein duf1735 | B0O44_103222 | Not Available | Positive | 2126039 - 2127316 | 46152.2 |
| glycosyl hydrolase family 26 | B0O44_103223 | Not Available | Positive | 2127350 - 2128306 | 35792.5 |
| beta-glucosidase | B0O44_103224 | Not Available | Positive | 2128339 - 2130582 | 82477.8 |
| phospholipase c | B0O44_103225 | Not Available | Negative | 2130698 - 2133112 | 91755.2 |
| susd-like starch-binding protein associating with outer membrane | B0O44_103226 | Not Available | Negative | 2133167 - 2134732 | 58950.6 |
| tonb-linked susc/raga family outer membrane protein | B0O44_103227 | Not Available | Negative | 2134745 - 2138077 | 123974.0 |
| fecr family protein | B0O44_103228 | Not Available | Negative | 2138344 - 2139498 | 43095.1 |
| rna polymerase sigma-70 factor (ecf subfamily) | B0O44_103229 | Not Available | Negative | 2139609 - 2140148 | 21170.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

