Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 5'-nucleotidase | B0O44_103210 | Not Available | Negative | 2100334 - 2101275 | 33707.5 |
| microcystin-dependent protein | B0O44_103211 | Not Available | Positive | 2101602 - 2102147 | 19409.8 |
| microcystin-dependent protein | B0O44_103212 | Not Available | Positive | 2102158 - 2102724 | 19413.2 |
| microcystin-dependent protein | B0O44_103213 | Not Available | Positive | 2102736 - 2103293 | 19423.9 |
| abc-type branched-subunit amino acid transport system substrate-binding protein | B0O44_103214 | Not Available | Positive | 2103300 - 2104445 | 42021.9 |
| gliding motility-associated-like protein | B0O44_103215 | Not Available | Positive | 2104490 - 2110723 | 209905.0 |
| hypothetical protein | B0O44_103216 | Not Available | Negative | 2110795 - 2111283 | 18754.8 |
| signal transduction histidine kinase | B0O44_103217 | Not Available | Positive | 2111651 - 2115796 | 157517.0 |
| tonb-linked susc/raga family outer membrane protein | B0O44_103218 | Not Available | Positive | 2116230 - 2119559 | 121708.0 |
| putative outer membrane starch-binding protein | B0O44_103219 | Not Available | Positive | 2119574 - 2121349 | 65277.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

