Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | B0O44_103200 | Not Available | Negative | 2086282 - 2088975 | 101819.0 |
| glpgli family protein | B0O44_103201 | Not Available | Negative | 2089025 - 2089867 | 31267.1 |
| ahpc/tsa family protein | B0O44_103202 | Not Available | Negative | 2089882 - 2090436 | 20879.6 |
| tolb-like protein | B0O44_103203 | Not Available | Negative | 2090439 - 2091482 | 39881.9 |
| hypothetical protein | B0O44_103204 | Not Available | Negative | 2091619 - 2091882 | 9167.72 |
| rna polymerase sigma-70 factor (ecf subfamily) | B0O44_103205 | Not Available | Positive | 2092180 - 2092755 | 22399.2 |
| fecr family protein | B0O44_103206 | Not Available | Positive | 2092838 - 2093959 | 41791.7 |
| tonb-linked susc/raga family outer membrane protein | B0O44_103207 | Not Available | Positive | 2094149 - 2097589 | 125597.0 |
| putative outer membrane starch-binding protein | B0O44_103208 | Not Available | Positive | 2097601 - 2099172 | 56274.7 |
| peroxiredoxin | B0O44_103209 | Not Available | Positive | 2099184 - 2100266 | 40011.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

