Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| iron complex outermembrane receptor protein | B0O44_103170 | Not Available | Positive | 2052747 - 2055707 | 106712.0 |
| putative outer membrane starch-binding protein | B0O44_103171 | Not Available | Positive | 2055724 - 2057322 | 58388.7 |
| uncharacterized protein duf5019 | B0O44_103172 | Not Available | Positive | 2057333 - 2058346 | 35803.9 |
| maltose phosphorylase | B0O44_103173 | Not Available | Positive | 2058358 - 2060667 | 89018.5 |
| rna polymerase sigma-70 factor (ecf subfamily) | B0O44_103174 | Not Available | Positive | 2060719 - 2061288 | 22130.7 |
| hypothetical protein | B0O44_103175 | Not Available | Positive | 2061275 - 2061682 | 15354.0 |
| hypothetical protein | B0O44_103176 | Not Available | Negative | 2061746 - 2062138 | 14957.8 |
| outer membrane receptor protein involved in fe transport | B0O44_103177 | Not Available | Negative | 2062235 - 2064625 | 90894.1 |
| histidine kinase | B0O44_103178 | Not Available | Positive | 2064764 - 2065783 | 40526.2 |
| lyttr family two component transcriptional regulator | B0O44_103179 | Not Available | Positive | 2065798 - 2066496 | 27357.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

