Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | B0O44_101168 | Not Available | Positive | 226608 - 227246 | 22079.6 |
| polyphosphate kinase | B0O44_101169 | Not Available | Positive | 227313 - 229412 | 81483.2 |
| exopolyphosphatase/guanosine-5'-triphosphate, 3'-diphosphate pyrophosphatase | B0O44_101170 | Not Available | Positive | 229417 - 230298 | 33177.2 |
| 4'-phosphopantetheinyl transferase superfamily protein | B0O44_101171 | Not Available | Negative | 230295 - 230768 | 17893.6 |
| acyl carrier protein | B0O44_101172 | Not Available | Negative | 230758 - 231018 | 9900.81 |
| 3-oxoacyl-(acyl-carrier-protein) synthase | B0O44_101173 | Not Available | Negative | 231011 - 232288 | 44993.5 |
| 3-hydroxyacyl-[acyl-carrier-protein] dehydratase | B0O44_101174 | Not Available | Negative | 232281 - 232727 | 16504.1 |
| putative naringenin-chalcone synthase | B0O44_101175 | Not Available | Negative | 232740 - 233795 | 39325.2 |
| hypothetical protein | B0O44_101176 | Not Available | Negative | 233782 - 234504 | 27706.9 |
| flavin-dependent dehydrogenase | B0O44_101177 | Not Available | Negative | 234494 - 235630 | 42607.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

