Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | B0O44_103140 | Not Available | Positive | 2025213 - 2025335 | 4597.69 |
| outer membrane protein with beta-barrel domain | B0O44_103141 | Not Available | Positive | 2025449 - 2026057 | 21911.4 |
| ghkl domain-containing protein | B0O44_103142 | Not Available | Positive | 2026081 - 2027139 | 40667.3 |
| lyttr family two component transcriptional regulator | B0O44_103143 | Not Available | Positive | 2027144 - 2027893 | 28703.9 |
| hypothetical protein | B0O44_103144 | Not Available | Positive | 2028168 - 2029016 | 31329.5 |
| rna ligase | B0O44_103145 | Not Available | Positive | 2029278 - 2029859 | 23125.1 |
| hypothetical protein | B0O44_103146 | Not Available | Positive | 2029878 - 2030045 | 6451.53 |
| putative nucleotidyltransferase with hdig domain | B0O44_103147 | Not Available | Positive | 2030017 - 2031138 | 43347.0 |
| hypothetical protein | B0O44_103148 | Not Available | Negative | 2031613 - 2032020 | 15522.4 |
| putative mfs family arabinose efflux permease | B0O44_103149 | Not Available | Negative | 2032017 - 2033405 | 51272.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

