Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| prolipoprotein diacylglyceryl transferase | B0O44_103120 | Not Available | Positive | 2002590 - 2003432 | 32543.4 |
| dhna family fructose-bisphosphate aldolase class ia | B0O44_103121 | Not Available | Positive | 2003532 - 2004401 | 32483.0 |
| arac-like dna-binding protein | B0O44_103122 | Not Available | Positive | 2004523 - 2005113 | 22918.5 |
| pap2 superfamily protein | B0O44_103123 | Not Available | Positive | 2005795 - 2006577 | 28687.4 |
| hypothetical protein | B0O44_103124 | Not Available | Positive | 2007643 - 2008146 | 19330.8 |
| uncharacterized protein (duf305 family) | B0O44_103125 | Not Available | Positive | 2008209 - 2008886 | 25033.2 |
| uncharacterized protein (duf305 family) | B0O44_103126 | Not Available | Positive | 2008945 - 2009565 | 23332.7 |
| uncharacterized protein duf326 | B0O44_103127 | Not Available | Positive | 2009592 - 2009936 | 12296.7 |
| copa family copper-resistance protein | B0O44_103128 | Not Available | Positive | 2010211 - 2013000 | 105676.0 |
| cu2+-exporting atpase | B0O44_103129 | Not Available | Positive | 2013011 - 2015563 | 92127.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

