Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane protein tolc | B0O44_103110 | Not Available | Positive | 1989702 - 1990895 | 44997.9 |
| rnd family efflux transporter mfp subunit | B0O44_103111 | Not Available | Positive | 1990892 - 1992571 | 60124.1 |
| ketosteroid isomerase-like protein | B0O44_103112 | Not Available | Positive | 1992579 - 1993040 | 17179.6 |
| hypothetical protein | B0O44_103113 | Not Available | Positive | 1993414 - 1994397 | 35596.1 |
| hypothetical protein | B0O44_103114 | Not Available | Positive | 1994435 - 1994869 | 15497.6 |
| hme family heavy-metal exporter | B0O44_103115 | Not Available | Positive | 1994994 - 1998212 | 117852.0 |
| hypothetical protein | B0O44_103116 | Not Available | Positive | 1998397 - 1998579 | 6417.7 |
| ftsp/cota-like multicopper oxidase with cupredoxin domain | B0O44_103117 | Not Available | Positive | 1998604 - 1999911 | 48845.3 |
| cu2+-exporting atpase | B0O44_103118 | Not Available | Positive | 1999922 - 2002018 | 75356.5 |
| rimj/riml family protein n-acetyltransferase | B0O44_103119 | Not Available | Positive | 2002045 - 2002557 | 19677.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

