Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | B0O44_103100 | Not Available | Positive | 1980622 - 1981017 | 14656.0 |
| copper chaperone copz | B0O44_103101 | Not Available | Positive | 1981118 - 1981486 | 13534.5 |
| czca family heavy metal efflux pump | B0O44_103102 | Not Available | Positive | 1981534 - 1982826 | 48128.5 |
| cu(i)/ag(i) efflux system membrane protein cusa/sila | B0O44_103103 | Not Available | Positive | 1982829 - 1984766 | 71982.9 |
| outer membrane protein tolc | B0O44_103104 | Not Available | Positive | 1984753 - 1986000 | 47807.9 |
| hlyd family secretion protein | B0O44_103105 | Not Available | Positive | 1985978 - 1987186 | 44206.3 |
| cu(i)/ag(i) efflux system membrane fusion protein | B0O44_103106 | Not Available | Positive | 1987191 - 1988408 | 44845.2 |
| uncharacterized protein duf3347 | B0O44_103107 | Not Available | Positive | 1988443 - 1988997 | 19627.2 |
| hypothetical protein | B0O44_103108 | Not Available | Positive | 1989141 - 1989608 | 17081.5 |
| hypothetical protein | B0O44_103109 | Not Available | Negative | 1989548 - 1989685 | 5150.47 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

